Zhenyuan Lu

Zhenyuan Lu

Zhenyuan Lu

Hi there! I am a deep learning engineer at Seurat and AI/ML researcher. I earned my PhD and was a data science instructor at Northeastern University. My PhD journey is showcased on the University PhD Network. The College of Engineering released a spotlight for a Student Success Story.

Check out my Python tutorial: Python Notebook from Zero to Advanced or get visual with my R tutorial on Data Visualization/Transformation Tutorial in R. Don’t miss my guide on Data Visualization Data Viz in a Nutshell. When I am not at work, you will find me behind the lens in my very own photography studio, snapping everything from sassy portraits to whimsical whatever.

Software/Tools

For open-source spirit.
A Python Tool for Bridging Scientific Knowledge through Keyword Analysis.

Selected Publications

For understanding the difficulty.

2024

The Evolution of Digital Twins Research Analysis

Image created by Amol Adgaonkar. Not included in the original publication.

Wei Li , Haozhou Zhou , Zhenyuan Lu , Sagar Kamarthi

HTML

pyKCN A Python Tool for Bridging Scientific Knowledge

Zhenyuan Lu , Wei Li , Burcu Ozek , Haozhou Zhou , Srinivasan Radhakrishnan , Sagar Kamarthi

Code PDF arxiv: 2403.16157

2023

Transformer encoder with multiscale deep learning for pain classification using physiological signals

Frontiers in Physiology

Zhenyuan Lu , Burcu Ozek , Sagar Kamarthi

HTML Code

Wrist Motion and Hand Gesture Classification

PainAttnNet Model Extended Version on Motion Detection based on Signals.

Zhenyuan Lu

HTML Code PDF

Analysis of Pain Research Literature through Keyword Co-occurrence Networks

Burcu Ozek , Zhenyuan Lu , Fatemeh Pouromran , Srinivasan Radhakrishnan , Sagar Kamarthi

HTML

Uncertainty Quantification in Neural-Network Based Pain Intensity Estimation

Burcu Ozek , Zhenyuan Lu , Srinivasan Radhakrishnan , Sagar Kamarthi

PDF arxiv: 2311.08569 html5

2022

Artifacts Analysis and Mitigation in Natural Language Processing

Multi-Scales Data Augmentation Approach with ELECTRA Pre-Trained Model.

Zhenyuan Lu

HTML PDF arxiv: 2212.08756

Intro to Contrastive Learning Pretext Task for Signal Representation

Intro to Contrastive Learning

Zhenyuan Lu

HTML PDF arxiv: 2210.03163

Industry 4.0 for Asset Life Cycle Management for Sustainability - Keyword Co-occurrence Network Review and Analysis

Sachini Weerasekara , Zhenyuan Lu , Burcu Ozek , Jacqueline Isaacs , Sagar Kamarthi

HTML PDF

Featured Projects/Blogs

For work, research, or fun.

Intro to Self-supervised Learning

Zhenyuan Lu

Talk, School of Medicine, University of Washington, Seattle

Data Visualization In A Nutshell

Zhenyuan Lu

Talk, informs, Northeastern University, Boston

github Slides

Data Visualization Tutorial in R/R Shiny

Introduces static and interactive visualization, dashboard, and web app in R/R Shiny.

Zhenyuan Lu

HTML Code

Applications of Artificial Intelligence in Healthcare

HIA Immersion Weekend Jan 8th, 2021

Zhenyuan Lu

Workshop, Tufts University, Boston

Integration of A Lateral Flow Immunoassay Panel with 3D-printed and Laser-cut Cartridge for Gastroenteritis

Master thesis, SBIR Program, DTRA Project

Zhenyuan Lu

Blog PDF Patent

hierAlytics

An easy-to-use analytics web app for exploring and analyzing data based on hierarchical tree.

Zhenyuan Lu

Blog

MealthUp™

A new era of health consultant & personalized meal plan implemented machine learning techniques.

Zhenyuan Lu

Blog

Teachings

For sharing the joy of what I have learnt.

Tutorials/Books
- Python Notebook from Zero to Advanced
- Data Visualization/Transformation Tutorial in R
Lecturer, IE5976 Python for Object-Oriented Programming: Summer 23
Lecturer, IE6600 Computation and Visualization for Analytics
- Spring 23, Fall 22, Summer 22, Spring 22, Fall 21, Summer 21, Spring 21, Fall 20, Spring 20, Spring 19
Lecturer, IE7275 Data Mining in Engineering: Summer 20
Graduate Instructor Assistant, BIO1421 Modern Biology
- Fall 2014-Spring 2017, Course Supervisor Prof. David E. Lemke

Field Researches and Teachings at Texas

For involving the world.

What is a Good Graduate Program?

I received numerous emails from my students asking about what constitutes a good graduate program. I’d like to share with you some insightful words from Dr. Yiqing Xu of Stanford University (I translated it into English):

“The criteria for evaluating a good graduate program is how much time is spent on the continuous accumulation of knowledge and skills (during which the learning curve can be linear or even exponential) and how much time is spent on simple repetitive tasks that do not lead to the improvement of knowledge and skills.”